SILVA Tree Viewer

SILVA Tree Viewer is a web-based tool to visualize large phylogenetic trees. The SILVA interface uses Web Geographic Information Systems (Web-GIS) Recourse and a PostgreSQL database.

Topic

Phylogenetics;Sequence analysis

Detail

  • Operation: Phylogenetic tree analysis

  • Software interface: Web user interface

  • Language: Python

  • License: -

  • Cost: Free

  • Version name: -

  • Credit: The Federal Ministry of Education and Research (BMBF) project de.NBI (German Network for Bioinformatics Infrastructure), the Max Planck Society.

  • Input: -

  • Output: -

  • Contact: Alan Beccati a.beccati@jacobs-university.de, fog@mpi-bremen.de

  • Collection: -

  • Maturity: -

Publications

  • SILVA tree viewer: interactive web browsing of the SILVA phylogenetic guide trees.
  • Beccati A, Gerken J, Quast C, Yilmaz P, Glöckner FO. SILVA tree viewer: interactive web browsing of the SILVA phylogenetic guide trees. BMC Bioinformatics. 2017 Sep 30;18(1):433. doi: 10.1186/s12859-017-1841-3. PMID: 28964270; PMCID: PMC5622420.
  • https://doi.org/10.1186/s12859-017-1841-3
  • PMID: 28964270
  • PMC: PMC5622420

Download and documentation

    Currently not available or not maintained.

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